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Coalescence

Add MS 86723 : 1991-1999

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  • Title:
    Coalescence
  • Collection Area: Western Manuscripts
  • Reference: Add MS 86723
  • Creation Date: 1991-1999
  • Extent and Access:
    Extent:
    3 sub-folders

  • Language: English
  • Contents and Scope:
    Contents:

    Some items are undated.

    Folder marked 'Simulating coalescence times'. Contents include:

    • Handwritten notes and computer printouts relating to 'keep2.m'; 1 Feb 1999.
    • Handwritten notes and computer printouts relating to 'keepsubd.m'; 8 Feb 1999.
    • Computer printout for 'keep2 – modified to record mean pair wise coalescence'; 4 Feb 1999?
    • Handwritten notes relating to 'coalescence time – simulations'; 5 Feb 1999?

    Folder marked 'Coalescence – theory'. Contents include:

    • Letter to Maynard Smith from Richard R. Hudson; 21 Feb 1994. Attached is a photocopy of graphs showing frequency distribution of pair wise differences, from Montgomery Slatkin and Richard R. Hudson, ‘Pairwise Comparisons of Mitochondrial DNA Sequences in Stable and Exponentially Growing Populations’, Genetics , 129 (1991), 555-562.
    • Hanwritten notes on ‘The Model’.
    • Handwritten notes relating to 'the distribution of coalescence times'.
    • John Maynard Smith, 'The distribution of coalescence times'.
    • Handwritten notes relating to 'coalescence models – simulations'.
    • Handwritten notes relating to 'for a population…'.
    • Handwritten notes relating to 'can we can tell a bush from a panmictic population?'

    Folder marked 'Coalescence times – programs "coal 1" "coal 2"'. Contents include:

    • Letter to Maynard Smith from Bernhard Haubold; 26 Jun 1996, including computer generated diagram of 'output from coalescence'.
    • Handwritten notes and computer printouts relating to program "coal 1"; undated and 17 Jan 1994.
    • Handwritten notes and computer printouts summarising 12 runs of 'coal 2'; 12 Jan 1994 - 7 March 1994.
    • Handwritten notes and computer printouts relating to runs of 'coal 4' with selection; undated and March 1994.
    • Handwritten notes and computer printouts summarising runs of 'coal 3'; March 1994.
    • Handwritten notes relating to 'coal 4'; 10 Jun 1996.
    • Handwritten notes relating to 'coalescence programs'; 12 Jun 1996.
    • Handwritten notes and programs relating to 'some runs of coalescence programs'; Jun 1996.
    • Handwritten notes on 'results of coalescence programs'.

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