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Add MS 86694

Record Id:
040-000491414
Hierarchy Root Ancestor Record Id:
032-000375067
MDARK:
ark:/81055/vdc_100000000228.0x0001a8
LARK:
SLARK:
Format:
ISAD(G)
Reference (shelfmark):
Add MS 86694
Title:
Site Specific Codon B
Scope & Content:

Some items are undated.

Folder marked 'CODON BIAS in gap, ompA. Summaries and calculations 'testq''.

  • Computer printout of listing for 'newbias2'; 6 Sep 1994.
  • Handwritten notes and figures relating to 'testing neighbours of K, T in threonine, glycine'.
  • Table showing intergenetic data for salmonella, photocopy.
  • Handwritten notes relating to testing Qs, attached is a computer printout.

Folder marked 'Codon bias theory + correspondence and dynamics of synthesis'.

  • Letter to Maynard Smith from Adam Eyre-Walker (Department of Biological Sciences, Rutgers University); 7 May 1994.
  • Letter to Maynard Smith from Montgomery Slatkin (Laboratoire Genome et Populations, Universite de Montpellier); 3 Jan 1994.
  • Letter from Maynard Smith to Montgomery Slatkin, attaching notes relating to optimal codon; 17 Jan 1994?
  • Letter to Maynard Smith from Montgomery Slatkin; 1 Feb 1994.
  • Letter to Maynard Smith from Montgomery Slatkin; 9 May 1994.
  • Letter from Maynard Smith to Montgomery Slatkin; 8 Jun 1994.
  • Letter to Maynard Smith from Montgomery Slatkin; 1 Jul 1994.
  • Handwritten notes on codon bias in bacteria.

Loose item

  • Handwritten table showing residue, codons, tRNAs, usage in gap and comments.

Folder marked 'Codon bias in gap gem "newbias", "newbias2", "pribias", "pribias2".'

  • Computer printout of a run of "pribias2" on eco2.gap10; 10 Oct 1993.
  • Computer printout for "newbias" run on gap10; 9 Sep 1994.
  • Computer printout of "newbias2" & "pribias"; 10 Oct 1994.
  • Computer printout of run of "newbias2" on eco2.coligap; 11 Oct 1994.
  • Handwritten notes relating to 'codon bias in gap and ompA'; 12 Oct 1994.
  • Computer printout for "newbias" listing and runs of eco2.proneg and eco2.proompa; 13 Feb 1995.
  • Computer printout for run of "newbias2" on profile, omitting strain 9; 28 Sep undated.
  • Computer printout of a run of "newbias2" on gap 10; 10 Oct undated.
  • Computer printout for "pribias" table 2.
  • Computer printout of runs of "newbias2" on gap 10.
  • Computer printout for '10data.doc'.
  • Computer printouts of runs of "newbias2" on 'eco2.gap10'.
  • Computer printout of "newbias" run on 'eco2.salgap'.
  • Computer printout for 'ecoli gap sequences 9 strains'.
  • Computer printouts for 'proneg.seq' and 'proompa.seq'.
  • Handwritten notes relating to 'newbias'.
  • Computer printouts on 'Ecoli gap xx'.
  • Computer printouts on "newbias" run on 'eco2.gap10'
  • Computer printout showing effect if amino acids in gap.

Folder marked 'Codon Bias in ompA, "newbias2", "pribias2"'.

  • Computer printout of "pribias2" using 'eco2.ompa10'.
  • Computer printout for 'ompa10.Maynard Smith'.
  • Computer printout showing 'analysis of eco2.ompa10' with runs of "newbias2" and "pribias2".

Folder marked 'Yarus & Folley RxxR YxxY programm "yarus"'

  • Handwritten notes relating to analysis of Yarus and Folley [data], including a computer printout.
  • M. Yarus, and L. S. Folley, 'Sense codons are found in specific contexts', Journal of Molecular Biology, 182 (1985), 529-540. Includes handwritten notes.
Collection Area:
Western Manuscripts
Project / Collection:
Additional Manuscripts
Hierarchy Record Ids:
032-000375067
036-000375071
040-000491414
Is part of:
Add MS 86569-86840 : John Maynard Smith Archive
Add MS 86597-86830 : Subject files

 

Add MS 86694 : Site Specific Codon B
Hierarchy:
032-000375067[0003]/036-000375071[0100]/040-000491414
Container:
View / search within Archive / Collection: Add MS 86569-86840
Record Type (Level):
File
Extent:
5 sub-folders and 1 loose item
Digitised Content:
Languages:
English
Scripts:
Latin
Start Date:
1985
End Date:
1994
Date Range:
1985-1994
Era:
CE
Access:

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User Conditions:
Material Type:
Archives and Manuscripts
Legal Status:
Not Public Record(s)